Source Themes

decorate: Differential Epigenetic Correlation Test

Identification of locally correlated clusters of epigenetics features (e.g., peaks of open chromatin).

Functional interpretation of genetic variants using deep learning predicts impact on chromatin accessibility and histone modification

Identifying functional variants underlying disease risk and adoption of personalized medicine are currently limited by the challenge of interpreting the functional consequences of genetic variants. Predicting the functional effects of …

CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder

An unified resource of genome (SNP array), transcriptome (RNA-seq) and epigenome (ATAC-seq) datasets from CommonMind consortia.

The Mount Sinai cohort of large-scale genomic, transcriptomic and proteomic data in Alzheimer's disease

An unified resource of genome (WGS/WES), transcriptome (RNA-seq) and proteome from MSBB AMP-AD consortia.

An atlas of chromatin accessibility in the adult human brain

Here, we generated ATAC-seq atlas from 14 brain regions and two cell types of human brains.

NewProt - a protein engineering portal

Complex protein engineering portal combining sofware tools from multiple consortia members.

FireProt: web server for automated design of thermostable proteins

Webserver for design of enzyme mutations for improving their thermal stability.

HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering

One-stop-shop portal for protein engineers aiming to improve protein stability, activity, and/or enantioselectivity.

PredictSNP2: A Unified Platform for Accurately Evaluating SNP Effects by Exploiting the Different Characteristics of Variants in Distinct Genomic Regions

Meta-predictor of the effect of nucleic acid substitution on human health (rare diseases).

FireProt: Energy- and Evolution-Based Computational Design of Thermostable Multiple-Point Mutants

New approach for improving thermal stability of enzymes.